Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| agmatine deiminase family protein | CALAB_RS10720 | Not Available | Negative | 2699963 - 2701699 | 65297.2 |
| c25 family cysteine peptidase | CALAB_RS10725 | Not Available | Negative | 2701776 - 2705123 | 121843.0 |
| t9ss type a sorting domain-containing protein | CALAB_RS20075 | Not Available | Positive | 2705343 - 2709473 | 155546.0 |
| electron transfer flavoprotein subunit beta/fixa family protein | CALAB_RS10735 | Not Available | Positive | 2709923 - 2710813 | 32402.5 |
| electron transfer flavoprotein subunit alpha/fixb family protein | CALAB_RS10740 | Not Available | Positive | 2710853 - 2711872 | 37454.3 |
| acyl-coa dehydrogenase family protein | CALAB_RS10745 | Not Available | Positive | 2711892 - 2713613 | 65027.6 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 2714697 - 2716236 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 2716375 - 2716448 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 2716612 - 2716684 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2716827 - 2720261 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
