Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flgd immunoglobulin-like domain containing protein | CALAB_RS10620 | Not Available | Positive | 2671928 - 2674723 | 101067.0 |
| dmt family transporter | CALAB_RS10625 | Not Available | Positive | 2674747 - 2675079 | 11586.9 |
| t9ss type a sorting domain-containing protein | CALAB_RS10630 | Not Available | Positive | 2675560 - 2677746 | 80112.2 |
| tetratricopeptide repeat protein | CALAB_RS10635 | Not Available | Positive | 2678670 - 2680013 | 52425.9 |
| is1634 family transposase | CALAB_RS10640 | Not Available | Negative | 2680071 - 2681867 | 70253.2 |
| helix-turn-helix domain-containing protein | CALAB_RS10645 | Not Available | Positive | 2682002 - 2682358 | 13594.3 |
| sdr family nad(p)-dependent oxidoreductase | CALAB_RS10650 | Not Available | Negative | 2682380 - 2683222 | 31107.5 |
| glucose-6-phosphate isomerase | CALAB_RS10655 | Not Available | Negative | 2683489 - 2684868 | 51726.0 |
| atp-dependent clp protease atp-binding subunit | CALAB_RS10660 | Not Available | Negative | 2684978 - 2687446 | 92749.2 |
| hypothetical protein | CALAB_RS10665 | Not Available | Positive | 2687625 - 2688386 | 27996.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
