Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | CALAB_RS10570 | Not Available | Positive | 2644211 - 2647201 | 112894.0 |
| hypothetical protein | CALAB_RS10575 | Not Available | Positive | 2647258 - 2650632 | 124020.0 |
| porv/porq family protein | CALAB_RS10580 | Not Available | Positive | 2650680 - 2651714 | 37419.0 |
| hypothetical protein | CALAB_RS10585 | Not Available | Positive | 2652566 - 2655652 | 114789.0 |
| t9ss type a sorting domain-containing protein | CALAB_RS10590 | Not Available | Positive | 2655687 - 2659037 | 125485.0 |
| t9ss type a sorting domain-containing protein | CALAB_RS10595 | Not Available | Positive | 2659233 - 2662586 | 126565.0 |
| hybrid sensor histidine kinase/response regulator | CALAB_RS20070 | Not Available | Negative | 2662802 - 2666710 | 147849.0 |
| abc transporter permease | CALAB_RS10605 | Not Available | Negative | 2666995 - 2668251 | 47460.1 |
| abc transporter atp-binding protein | CALAB_RS10610 | Not Available | Negative | 2668244 - 2669152 | 34161.6 |
| lvivd repeat-containing protein | CALAB_RS10615 | Not Available | Positive | 2669724 - 2671868 | 78384.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
