Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | CALAB_RS00820 | Not Available | Positive | 218607 - 219353 | 28355.7 |
| class i sam-dependent methyltransferase | CALAB_RS00825 | Not Available | Positive | 219357 - 220088 | 28173.5 |
| zinc-ribbon domain-containing protein | CALAB_RS21005 | Not Available | Positive | 220187 - 220294 | 4248.89 |
| is1634 family transposase | CALAB_RS00830 | Not Available | Negative | 220369 - 222165 | 70253.2 |
| ygiq family radical sam protein | CALAB_RS00835 | Not Available | Positive | 222322 - 224058 | 66690.4 |
| hypothetical protein | CALAB_RS00840 | Not Available | Negative | 224324 - 224521 | 7679.28 |
| hypothetical protein | CALAB_RS21575 | Not Available | Negative | 224567 - 224701 | 5153.25 |
| type i restriction-modification system subunit m n-terminal domain-containing protein | CALAB_RS21470 | Not Available | Positive | 225106 - 225261 | 5916.17 |
| type i restriction-modification system subunit m | CALAB_RS00845 | Not Available | Positive | 225432 - 227570 | 80876.6 |
| duf262 domain-containing protein | CALAB_RS00850 | Not Available | Positive | 227567 - 229411 | 73637.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
