Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kh domain-containing protein | CALAB_RS10460 | Not Available | Positive | 2609153 - 2609383 | 8365.2 |
| ribosome maturation factor rimm | CALAB_RS10465 | Not Available | Positive | 2609390 - 2609893 | 19052.2 |
| trna (guanosine(37)-n1)-methyltransferase trmd | CALAB_RS10470 | Not Available | Positive | 2609895 - 2610596 | 26950.8 |
| 50s ribosomal protein l19 | CALAB_RS10475 | Not Available | Positive | 2610616 - 2610957 | 12968.3 |
| ig-like domain-containing protein | CALAB_RS10485 | Not Available | Positive | 2611587 - 2613269 | 63675.4 |
| diaminopimelate epimerase | CALAB_RS10490 | Not Available | Positive | 2613266 - 2614087 | 30004.4 |
| tetratricopeptide repeat protein | CALAB_RS10495 | Not Available | Positive | 2614127 - 2615059 | 35628.9 |
| mannose-1-phosphate guanylyltransferase | CALAB_RS10500 | Not Available | Positive | 2615174 - 2616250 | 40682.0 |
| hypothetical protein | CALAB_RS10505 | Not Available | Positive | 2616284 - 2616559 | 10852.2 |
| pilz domain-containing protein | CALAB_RS10510 | Not Available | Positive | 2616579 - 2616908 | 12221.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
