Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | CALAB_RS10410 | Not Available | Negative | 2598953 - 2599741 | 30111.8 |
| tatd family hydrolase | CALAB_RS10415 | Not Available | Negative | 2599768 - 2600544 | 29084.8 |
| methionine--trna ligase | CALAB_RS10420 | Not Available | Negative | 2600570 - 2602618 | 77669.2 |
| molybdenum cofactor guanylyltransferase | CALAB_RS10425 | Not Available | Positive | 2602793 - 2603389 | 22145.2 |
| molybdopterin-guanine dinucleotide biosynthesis protein b | CALAB_RS10430 | Not Available | Positive | 2603386 - 2603880 | 18401.2 |
| hsp20/alpha crystallin family protein | CALAB_RS10435 | Not Available | Negative | 2604365 - 2604802 | 16746.3 |
| duf6504 family protein | CALAB_RS10440 | Not Available | Positive | 2605065 - 2605325 | 10245.5 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | CALAB_RS10445 | Not Available | Positive | 2605761 - 2607113 | 52395.0 |
| signal recognition particle protein | CALAB_RS10450 | Not Available | Positive | 2607269 - 2608594 | 49243.9 |
| 30s ribosomal protein s16 | CALAB_RS21975 | Not Available | Positive | 2608620 - 2609054 | 16970.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
