Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit d | CALAB_RS10305 | Not Available | Positive | 2576058 - 2577278 | 45664.6 |
| fad-dependent oxidoreductase | CALAB_RS10310 | Not Available | Positive | 2577311 - 2579101 | 66499.6 |
| ferritin family protein | CALAB_RS10315 | Not Available | Positive | 2579119 - 2579592 | 18684.3 |
| response regulator | CALAB_RS10320 | Not Available | Negative | 2579589 - 2581835 | 85068.8 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | CALAB_RS10325 | Not Available | Negative | 2582015 - 2583565 | 58324.6 |
| flavoprotein | CALAB_RS10330 | Not Available | Negative | 2583998 - 2584543 | 20017.5 |
| nad(p)-dependent oxidoreductase | CALAB_RS10335 | Not Available | Positive | 2584794 - 2585654 | 31183.3 |
| ferritin-like domain-containing protein | CALAB_RS10340 | Not Available | Positive | 2585679 - 2586149 | 18503.9 |
| n-acetylmuramoyl-l-alanine amidase family protein | CALAB_RS20060 | Not Available | Positive | 2586374 - 2587924 | 59369.1 |
| glutamate racemase | CALAB_RS10355 | Not Available | Positive | 2587933 - 2588793 | 31448.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
