Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| jab domain-containing protein | CALAB_RS10200 | Not Available | Positive | 2552688 - 2553371 | 26658.5 |
| atp-dependent dna helicase | CALAB_RS10205 | Not Available | Positive | 2553375 - 2556203 | 111280.0 |
| type iv toxin-antitoxin system abiei family antitoxin domain-containing protein | CALAB_RS10210 | Not Available | Positive | 2556273 - 2556866 | 22614.7 |
| dna cytosine methyltransferase | CALAB_RS10215 | Not Available | Positive | 2556986 - 2558236 | 49038.3 |
| sensor histidine kinase | CALAB_RS10220 | Not Available | Positive | 2558233 - 2560341 | 81617.5 |
| hypothetical protein | CALAB_RS10225 | Not Available | Positive | 2560338 - 2561600 | 49020.8 |
| dna glycosylase | CALAB_RS10230 | Not Available | Positive | 2561593 - 2562249 | 25329.8 |
| site-specific dna-methyltransferase | CALAB_RS10235 | Not Available | Positive | 2562309 - 2564339 | 78499.1 |
| dead/deah box helicase | CALAB_RS10240 | Not Available | Positive | 2564342 - 2567083 | 105791.0 |
| marr family winged helix-turn-helix transcriptional regulator | CALAB_RS20055 | Not Available | Positive | 2567884 - 2568345 | 17700.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
