Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssra-binding protein smpb | CALAB_RS10100 | Not Available | Negative | 2530684 - 2531145 | 17979.2 |
| hypothetical protein | CALAB_RS10105 | Not Available | Negative | 2531300 - 2532622 | 51680.7 |
| dj-1/pfpi family protein | CALAB_RS10110 | Not Available | Positive | 2533028 - 2533615 | 21378.6 |
| mbl fold metallo-hydrolase | CALAB_RS10115 | Not Available | Positive | 2533770 - 2534777 | 38968.2 |
| hd-gyp domain-containing protein | CALAB_RS10120 | Not Available | Negative | 2535081 - 2536310 | 46365.5 |
| is4 family transposase | CALAB_RS21725 | Not Available | Negative | 2536591 - 2538024 | 54918.8 |
| duf4338 domain-containing protein | CALAB_RS21730 | Not Available | Negative | 2537997 - 2538734 | 28380.5 |
| penicillin-binding protein activator | CALAB_RS10130 | Not Available | Positive | 2539143 - 2541008 | 71742.2 |
| peptidoglycan editing factor pgef | CALAB_RS10135 | Not Available | Positive | 2541029 - 2541781 | 28037.8 |
| s8 family serine peptidase | CALAB_RS10140 | Not Available | Positive | 2541827 - 2543560 | 63709.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
