Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase | CALAB_RS10050 | Not Available | Positive | 2515065 - 2515517 | 16474.3 |
| beta strand repeat-containing protein | CALAB_RS10055 | Not Available | Positive | 2515706 - 2519227 | 120343.0 |
| hypothetical protein | CALAB_RS10060 | Not Available | Negative | 2520099 - 2521307 | 46691.5 |
| had-iib family hydrolase | CALAB_RS10065 | Not Available | Negative | 2521323 - 2522141 | 30705.1 |
| dna polymerase/3'-5' exonuclease polx | CALAB_RS10070 | Not Available | Positive | 2522271 - 2524007 | 65494.1 |
| phosphate acyltransferase plsx | CALAB_RS10075 | Not Available | Positive | 2524086 - 2525135 | 37861.2 |
| sigma-54-dependent transcriptional regulator | CALAB_RS10080 | Not Available | Positive | 2525459 - 2526808 | 52335.4 |
| diaminopimelate decarboxylase | CALAB_RS10085 | Not Available | Positive | 2526898 - 2528154 | 46442.4 |
| alanine racemase | CALAB_RS10090 | Not Available | Positive | 2528156 - 2529271 | 42061.4 |
| duf4835 family protein | CALAB_RS10095 | Not Available | Positive | 2529369 - 2530205 | 32838.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
