Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stage 0 sporulation family protein | CALAB_RS09950 | Not Available | Positive | 2493916 - 2494752 | 32266.4 |
| l-2-hydroxyglutarate oxidase | CALAB_RS09955 | Not Available | Positive | 2494733 - 2495947 | 45017.7 |
| hypothetical protein | CALAB_RS09960 | Not Available | Negative | 2496527 - 2496784 | 10570.8 |
| serine--trna ligase | CALAB_RS09965 | Not Available | Positive | 2497021 - 2498304 | 49063.6 |
| lysophospholipid acyltransferase family protein | CALAB_RS09970 | Not Available | Positive | 2498320 - 2499033 | 26842.4 |
| diguanylate cyclase | CALAB_RS20045 | Not Available | Negative | 2499055 - 2500689 | 63007.3 |
| pp2c family protein-serine/threonine phosphatase | CALAB_RS20050 | Not Available | Negative | 2500699 - 2502609 | 73336.1 |
| sdr family nad(p)-dependent oxidoreductase | CALAB_RS09985 | Not Available | Negative | 2502809 - 2503543 | 26679.4 |
| mbl fold metallo-hydrolase | CALAB_RS09990 | Not Available | Negative | 2503547 - 2504173 | 23416.9 |
| 2-hydroxyacid dehydrogenase | CALAB_RS09995 | Not Available | Negative | 2504196 - 2505167 | 35818.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
