Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoprenyl transferase | CALAB_RS09800 | Not Available | Positive | 2458722 - 2459489 | 29387.3 |
| hypothetical protein | CALAB_RS09805 | Not Available | Positive | 2459498 - 2459911 | 15120.5 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | CALAB_RS09810 | Not Available | Positive | 2459916 - 2461211 | 48969.3 |
| transcription termination factor rho | CALAB_RS09815 | Not Available | Positive | 2461484 - 2462731 | 47289.4 |
| 50s ribosomal protein l31 | CALAB_RS09820 | Not Available | Positive | 2462802 - 2463002 | 7428.09 |
| duf1385 domain-containing protein | CALAB_RS09825 | Not Available | Positive | 2463096 - 2464106 | 37339.5 |
| peptide chain release factor 1 | CALAB_RS09830 | Not Available | Positive | 2464115 - 2465194 | 40323.7 |
| sigma-54-dependent transcriptional regulator | CALAB_RS09835 | Not Available | Negative | 2465517 - 2466896 | 51833.7 |
| sensor histidine kinase | CALAB_RS20030 | Not Available | Negative | 2466893 - 2468899 | 76599.4 |
| tetr/acrr family transcriptional regulator | CALAB_RS09845 | Not Available | Positive | 2469090 - 2469671 | 22355.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
