Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | CALAB_RS09750 | Not Available | Positive | 2447859 - 2448512 | 24254.6 |
| site-2 protease family protein | CALAB_RS09755 | Not Available | Positive | 2448668 - 2449798 | 43286.7 |
| hypothetical protein | CALAB_RS09760 | Not Available | Positive | 2449811 - 2450401 | 23108.1 |
| gtpase era | CALAB_RS09765 | Not Available | Positive | 2450398 - 2451297 | 34708.5 |
| sigma-54-dependent transcriptional regulator | CALAB_RS09770 | Not Available | Negative | 2451358 - 2452719 | 52154.9 |
| pas domain-containing sensor histidine kinase | CALAB_RS09775 | Not Available | Negative | 2452733 - 2454163 | 54455.5 |
| glutamate--trna ligase | CALAB_RS09780 | Not Available | Negative | 2454156 - 2455610 | 56342.9 |
| mfs transporter | CALAB_RS09785 | Not Available | Positive | 2455758 - 2457026 | 47411.8 |
| duf72 domain-containing protein | CALAB_RS09790 | Not Available | Negative | 2457006 - 2457818 | 32116.0 |
| sdr family nad(p)-dependent oxidoreductase | CALAB_RS09795 | Not Available | Positive | 2457882 - 2458598 | 26495.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
