Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatase pap2 family protein | CALAB_RS09700 | Not Available | Positive | 2436799 - 2437557 | 29003.2 |
| outer membrane lipoprotein-sorting protein | CALAB_RS09705 | Not Available | Positive | 2437580 - 2438320 | 28663.8 |
| duf1302 family protein | CALAB_RS09710 | Not Available | Positive | 2438451 - 2439794 | 50686.1 |
| dna-directed rna polymerase subunit omega | CALAB_RS09715 | Not Available | Positive | 2440577 - 2440879 | 11805.2 |
| amidohydrolase | CALAB_RS09720 | Not Available | Positive | 2440910 - 2442484 | 58873.6 |
| is200/is605 family transposase | CALAB_RS09725 | Not Available | Negative | 2443019 - 2443471 | 17900.7 |
| hypothetical protein | CALAB_RS09730 | Not Available | Positive | 2443579 - 2443968 | 14882.2 |
| stas domain-containing protein | CALAB_RS09735 | Not Available | Positive | 2444439 - 2444780 | 12294.5 |
| gaf domain-containing protein | CALAB_RS09740 | Not Available | Positive | 2445079 - 2446833 | 66442.7 |
| histone deacetylase | CALAB_RS09745 | Not Available | Positive | 2446836 - 2447780 | 34928.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
