Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp2c family protein-serine/threonine phosphatase | CALAB_RS09650 | Not Available | Negative | 2425762 - 2427393 | 61925.9 |
| hypothetical protein | CALAB_RS09655 | Not Available | Negative | 2427326 - 2427850 | 20175.3 |
| hypothetical protein | CALAB_RS09660 | Not Available | Negative | 2427847 - 2429037 | 44795.9 |
| adenylate kinase | CALAB_RS09665 | Not Available | Negative | 2429132 - 2429791 | 24859.1 |
| d-alanyl-d-alanine dipeptidase | CALAB_RS09670 | Not Available | Negative | 2429872 - 2430501 | 24372.8 |
| branched-chain amino acid aminotransferase | CALAB_RS09675 | Not Available | Positive | 2430802 - 2431833 | 38594.3 |
| duf948 domain-containing protein | CALAB_RS09680 | Not Available | Negative | 2431877 - 2432215 | 12857.1 |
| ytxh domain-containing protein | CALAB_RS09685 | Not Available | Negative | 2432379 - 2432732 | 13199.5 |
| tetr/acrr family transcriptional regulator | CALAB_RS09690 | Not Available | Positive | 2433228 - 2433818 | 22607.4 |
| efflux rnd transporter permease subunit | CALAB_RS09695 | Not Available | Positive | 2433885 - 2436797 | 108726.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
