Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol-phosphatase hisj | CALAB_RS09600 | Not Available | Positive | 2413791 - 2414612 | 31590.0 |
| coa-binding protein | CALAB_RS09605 | Not Available | Positive | 2414624 - 2415043 | 15741.3 |
| trab/gumn family protein | CALAB_RS09610 | Not Available | Positive | 2415054 - 2415920 | 32661.8 |
| duf72 domain-containing protein | CALAB_RS09615 | Not Available | Positive | 2415933 - 2416703 | 30828.7 |
| exo-beta-n-acetylmuramidase namz domain-containing protein | CALAB_RS09620 | Not Available | Positive | 2416721 - 2417953 | 46194.2 |
| is1182 family transposase | CALAB_RS09625 | Not Available | Negative | 2418018 - 2419604 | 61352.2 |
| glycoside hydrolase family 97 protein | CALAB_RS09630 | Not Available | Negative | 2420696 - 2422726 | 78314.4 |
| spoiie family protein phosphatase | CALAB_RS09635 | Not Available | Negative | 2423138 - 2424913 | 66637.1 |
| atp-binding protein | CALAB_RS09640 | Not Available | Negative | 2424920 - 2425366 | 16989.6 |
| stas domain-containing protein | CALAB_RS09645 | Not Available | Negative | 2425406 - 2425747 | 12896.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
