Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lamin tail domain-containing protein | CALAB_RS20025 | Not Available | Positive | 2401536 - 2402846 | 47128.1 |
| sdia-regulated domain-containing protein | CALAB_RS09555 | Not Available | Positive | 2402963 - 2403613 | 24130.6 |
| translation elongation factor 4 | CALAB_RS09560 | Not Available | Positive | 2403807 - 2405612 | 67953.0 |
| signal peptidase i | CALAB_RS09565 | Not Available | Positive | 2405631 - 2406347 | 27776.7 |
| radical sam family heme chaperone hemw | CALAB_RS09570 | Not Available | Positive | 2406344 - 2407504 | 44924.4 |
| tetratricopeptide repeat protein | CALAB_RS09575 | Not Available | Positive | 2407479 - 2409314 | 70989.0 |
| hypothetical protein | CALAB_RS09580 | Not Available | Positive | 2409314 - 2410576 | 48210.7 |
| secondary thiamine-phosphate synthase enzyme yjbq | CALAB_RS09585 | Not Available | Positive | 2410653 - 2411051 | 14753.6 |
| hypothetical protein | CALAB_RS09590 | Not Available | Positive | 2411293 - 2412900 | 62877.9 |
| rossmann-like and duf2520 domain-containing protein | CALAB_RS09595 | Not Available | Positive | 2412935 - 2413801 | 32294.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
