Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | CALAB_RS20015 | Not Available | Negative | 2390684 - 2392153 | 54938.2 |
| phnd/ssua/transferrin family substrate-binding protein | CALAB_RS09505 | Not Available | Negative | 2392153 - 2393091 | 34880.1 |
| hypothetical protein | CALAB_RS09510 | Not Available | Positive | 2393393 - 2393980 | 22739.5 |
| mth938-like domain-containing protein | CALAB_RS09515 | Not Available | Positive | 2394044 - 2394442 | 14595.8 |
| cyth domain-containing protein | CALAB_RS09520 | Not Available | Positive | 2394564 - 2395046 | 18497.1 |
| tripartite tricarboxylate transporter substrate-binding protein | CALAB_RS20020 | Not Available | Positive | 2395060 - 2396559 | 56063.9 |
| tripartite tricarboxylate transporter permease | CALAB_RS09530 | Not Available | Positive | 2396579 - 2398075 | 52894.1 |
| duf47 domain-containing protein | CALAB_RS09535 | Not Available | Positive | 2398085 - 2398729 | 25132.4 |
| inorganic phosphate transporter | CALAB_RS09540 | Not Available | Positive | 2398742 - 2400223 | 53865.6 |
| opro/oprp family phosphate-selective porin | CALAB_RS09545 | Not Available | Positive | 2400240 - 2401523 | 48985.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
