Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-ribbon domain-containing protein | CALAB_RS09450 | Not Available | Positive | 2372202 - 2373066 | 32737.3 |
| pmeii family type ii restriction endonuclease | CALAB_RS09455 | Not Available | Positive | 2373056 - 2373781 | 28169.8 |
| mate family efflux transporter | CALAB_RS09460 | Not Available | Negative | 2373759 - 2375138 | 50413.9 |
| uvrd-helicase domain-containing protein | CALAB_RS09465 | Not Available | Positive | 2375391 - 2378615 | 122036.0 |
| redox-regulated atpase ychf | CALAB_RS09470 | Not Available | Positive | 2379471 - 2380550 | 40755.1 |
| phoh family protein | CALAB_RS09475 | Not Available | Positive | 2380624 - 2382036 | 54226.4 |
| c25 family cysteine peptidase | CALAB_RS09480 | Not Available | Negative | 2382167 - 2385700 | 130393.0 |
| arsr/smtb family transcription factor | CALAB_RS09485 | Not Available | Negative | 2385989 - 2386333 | 13294.5 |
| tex family protein | CALAB_RS09490 | Not Available | Positive | 2386723 - 2388891 | 81169.2 |
| sigma-54-dependent transcriptional regulator | CALAB_RS09495 | Not Available | Negative | 2389302 - 2390687 | 52796.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
