Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 1a | CALAB_RS09395 | Not Available | Negative | 2357844 - 2360012 | 82200.5 |
| tetratricopeptide repeat protein | CALAB_RS09400 | Not Available | Positive | 2360424 - 2362109 | 65230.1 |
| duf4292 domain-containing protein | CALAB_RS09405 | Not Available | Positive | 2362106 - 2362897 | 30815.4 |
| glycosyltransferase family 2 protein | CALAB_RS09410 | Not Available | Positive | 2362911 - 2363834 | 35259.5 |
| glycosyltransferase | CALAB_RS09415 | Not Available | Positive | 2363846 - 2364880 | 39249.2 |
| hypothetical protein | CALAB_RS09425 | Not Available | Positive | 2364994 - 2367390 | 92171.6 |
| glycosyltransferase family 2 protein | CALAB_RS09430 | Not Available | Positive | 2367710 - 2368639 | 36059.3 |
| dna-3-methyladenine glycosylase | CALAB_RS09435 | Not Available | Positive | 2368649 - 2369281 | 23792.1 |
| class i sam-dependent methyltransferase | CALAB_RS09440 | Not Available | Positive | 2369294 - 2370094 | 31358.7 |
| is1634 family transposase | CALAB_RS09445 | Not Available | Positive | 2370365 - 2372026 | 64766.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
