Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | CALAB_RS21715 | Not Available | Negative | 2344992 - 2345549 | 21614.5 |
| homoaconitase | CALAB_RS09350 | Not Available | Positive | 2346149 - 2348122 | 71452.7 |
| bpl-n domain-containing protein | CALAB_RS09355 | Not Available | Positive | 2348247 - 2349338 | 40339.7 |
| duf4097 family beta strand repeat-containing protein | CALAB_RS09360 | Not Available | Negative | 2349429 - 2350352 | 33119.6 |
| class i adenylate-forming enzyme family protein | CALAB_RS09365 | Not Available | Positive | 2350487 - 2352082 | 60294.5 |
| choice-of-anchor v domain-containing protein | CALAB_RS20010 | Not Available | Positive | 2352294 - 2353103 | 28818.3 |
| 4a-hydroxytetrahydrobiopterin dehydratase | CALAB_RS09375 | Not Available | Positive | 2353232 - 2353513 | 10912.1 |
| amidohydrolase family protein | CALAB_RS09380 | Not Available | Positive | 2353813 - 2355786 | 74871.5 |
| nadph-dependent fmn reductase | CALAB_RS09385 | Not Available | Negative | 2355794 - 2356321 | 19701.1 |
| proline dehydrogenase family protein | CALAB_RS09390 | Not Available | Negative | 2356374 - 2357282 | 35003.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
