Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | CALAB_RS09295 | Not Available | Positive | 2332512 - 2333660 | 45913.3 |
| sdr family oxidoreductase | CALAB_RS09300 | Not Available | Negative | 2334077 - 2334862 | 28247.2 |
| endonuclease/exonuclease/phosphatase family protein | CALAB_RS09305 | Not Available | Negative | 2334882 - 2335829 | 36363.8 |
| duf6913 domain-containing protein | CALAB_RS09310 | Not Available | Negative | 2335846 - 2336370 | 20734.2 |
| replication-associated recombination protein a | CALAB_RS09315 | Not Available | Negative | 2336363 - 2337700 | 50015.3 |
| duf4139 domain-containing protein | CALAB_RS09320 | Not Available | Negative | 2337708 - 2339069 | 52431.7 |
| valine--trna ligase | CALAB_RS09325 | Not Available | Negative | 2339041 - 2341731 | 104981.0 |
| is1182 family transposase | CALAB_RS09330 | Not Available | Positive | 2342013 - 2343599 | 61382.2 |
| hypothetical protein | CALAB_RS21705 | Not Available | Negative | 2343902 - 2344075 | 6609.06 |
| is1634 family transposase | CALAB_RS21710 | Not Available | Negative | 2344186 - 2345007 | 31803.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
