Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter permease | CALAB_RS20700 | Not Available | Negative | 2319522 - 2320796 | 47574.0 |
| metal abc transporter substrate-binding protein | CALAB_RS20005 | Not Available | Negative | 2321032 - 2322072 | 39089.5 |
| hypothetical protein | CALAB_RS09255 | Not Available | Negative | 2322088 - 2323410 | 50486.9 |
| hypothetical protein | CALAB_RS09260 | Not Available | Negative | 2323610 - 2323894 | 10094.4 |
| glycerol dehydrogenase | CALAB_RS09265 | Not Available | Positive | 2324592 - 2325689 | 38924.9 |
| iron-containing alcohol dehydrogenase | CALAB_RS09270 | Not Available | Positive | 2325917 - 2327062 | 40433.9 |
| is1182 family transposase | CALAB_RS09275 | Not Available | Negative | 2327245 - 2328831 | 61382.2 |
| Trna-ala | Not Available | Not Available | Positive | 2329684 - 2329756 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2329887 - 2329970 | Not Available |
| omp28-related outer membrane protein | CALAB_RS09290 | Not Available | Positive | 2330079 - 2332133 | 76631.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
