Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CALAB_RS09030 | Not Available | Negative | 2262464 - 2263216 | 29008.9 |
| porv/porq family protein | CALAB_RS09035 | Not Available | Negative | 2263229 - 2264215 | 36126.3 |
| t9ss type a sorting domain-containing protein | CALAB_RS09040 | Not Available | Negative | 2264234 - 2266327 | 78622.2 |
| giy-yig nuclease family protein | CALAB_RS09045 | Not Available | Negative | 2266741 - 2267037 | 12301.8 |
| tonb-dependent receptor | CALAB_RS09050 | Not Available | Negative | 2267485 - 2270394 | 110962.0 |
| family 10 glycosylhydrolase | CALAB_RS09055 | Not Available | Negative | 2270503 - 2273004 | 93850.3 |
| duf2334 domain-containing protein | CALAB_RS19980 | Not Available | Negative | 2272970 - 2274157 | 45118.7 |
| alpha amylase family protein | CALAB_RS09065 | Not Available | Negative | 2274166 - 2275458 | 49995.7 |
| is200/is605 family transposase | CALAB_RS09075 | Not Available | Negative | 2276868 - 2277329 | 18112.8 |
| t9ss type a sorting domain-containing protein | CALAB_RS09080 | Not Available | Negative | 2277368 - 2278753 | 50369.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
