Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase domain-containing protein | CALAB_RS08980 | Not Available | Negative | 2248429 - 2249928 | 55871.7 |
| vlrf1 family aerf1-type release factor | CALAB_RS08985 | Not Available | Negative | 2251147 - 2252364 | 46339.9 |
| hded family acid-resistance protein | CALAB_RS08990 | Not Available | Negative | 2252410 - 2252982 | 20956.0 |
| is1182 family transposase | CALAB_RS08995 | Not Available | Negative | 2253534 - 2255120 | 61336.2 |
| flgd immunoglobulin-like domain containing protein | CALAB_RS19975 | Not Available | Positive | 2256014 - 2257369 | 48688.0 |
| metal abc transporter permease | CALAB_RS09005 | Not Available | Negative | 2257471 - 2258577 | 39819.2 |
| iron chelate uptake abc transporter family permease subunit | CALAB_RS09010 | Not Available | Negative | 2258574 - 2259707 | 40829.7 |
| metal abc transporter atp-binding protein | CALAB_RS09015 | Not Available | Negative | 2259736 - 2260506 | 28804.1 |
| metal abc transporter solute-binding protein, zn/mn family | CALAB_RS09020 | Not Available | Negative | 2260595 - 2261530 | 34708.1 |
| hypothetical protein | CALAB_RS09025 | Not Available | Negative | 2261804 - 2262445 | 24480.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
