Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CALAB_RS00670 | Not Available | Negative | 181151 - 182371 | 45602.7 |
| glycosyl hydrolase family 18 protein | CALAB_RS00675 | Not Available | Negative | 182464 - 184941 | 91771.0 |
| hypothetical protein | CALAB_RS00680 | Not Available | Positive | 185391 - 185852 | 17142.2 |
| isl3 family transposase | CALAB_RS00685 | Not Available | Negative | 185823 - 187055 | 48191.4 |
| sensor histidine kinase | CALAB_RS00690 | Not Available | Positive | 187618 - 190152 | 98654.3 |
| sigma-54-dependent transcriptional regulator | CALAB_RS00695 | Not Available | Positive | 190142 - 191512 | 51542.8 |
| hypothetical protein | CALAB_RS00700 | Not Available | Positive | 191794 - 192552 | 27392.8 |
| nudix domain-containing protein | CALAB_RS00705 | Not Available | Positive | 192659 - 193243 | 22312.6 |
| plp-dependent cysteine synthase family protein | CALAB_RS00710 | Not Available | Positive | 193458 - 194411 | 35368.5 |
| udp-n-acetylmuramate dehydrogenase | CALAB_RS00715 | Not Available | Positive | 194422 - 195417 | 36940.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
