Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytr c-terminal domain-containing protein | CALAB_RS08825 | Not Available | Positive | 2209362 - 2210006 | 24168.6 |
| ribosome silencing factor | CALAB_RS08830 | Not Available | Positive | 2210003 - 2210356 | 13651.4 |
| arginine--trna ligase | CALAB_RS08835 | Not Available | Positive | 2210353 - 2211987 | 62232.8 |
| pfkb family carbohydrate kinase | CALAB_RS08840 | Not Available | Positive | 2212000 - 2212899 | 33625.8 |
| hybrid sensor histidine kinase/response regulator | CALAB_RS08845 | Not Available | Negative | 2212900 - 2214093 | 45494.3 |
| hypothetical protein | CALAB_RS08850 | Not Available | Negative | 2214094 - 2214300 | 8056.63 |
| ammememoradisam system radical sam enzyme | CALAB_RS08855 | Not Available | Positive | 2214482 - 2215507 | 38952.8 |
| Trna-asn | Not Available | Not Available | Positive | 2215817 - 2215889 | Not Available |
| giy-yig nuclease family protein | CALAB_RS08865 | Not Available | Positive | 2215917 - 2216126 | 8548.27 |
| hypothetical protein | CALAB_RS08870 | Not Available | Positive | 2216218 - 2216814 | 22660.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
