Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CALAB_RS08775 | Not Available | Positive | 2200310 - 2200621 | 12261.9 |
| hypothetical protein | CALAB_RS08780 | Not Available | Negative | 2200627 - 2200815 | 7021.55 |
| endonuclease/exonuclease/phosphatase family protein | CALAB_RS08785 | Not Available | Positive | 2200990 - 2201931 | 35392.6 |
| vanz family protein | CALAB_RS08790 | Not Available | Negative | 2201918 - 2202337 | 16140.2 |
| atp-binding protein | CALAB_RS08795 | Not Available | Positive | 2202423 - 2202854 | 16332.5 |
| trna 2-thiouridine(34) synthase mnma | CALAB_RS08800 | Not Available | Positive | 2202871 - 2203995 | 41854.1 |
| is1182 family transposase | CALAB_RS08805 | Not Available | Positive | 2204308 - 2205894 | 61366.2 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | CALAB_RS08810 | Not Available | Positive | 2206362 - 2207177 | 29864.5 |
| pantoate--beta-alanine ligase | CALAB_RS08815 | Not Available | Positive | 2207164 - 2208012 | 32102.8 |
| hypothetical protein | CALAB_RS08820 | Not Available | Positive | 2208678 - 2209145 | 17709.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
