Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m14 family zinc carboxypeptidase | CALAB_RS19965 | Not Available | Positive | 2184315 - 2186750 | 91110.6 |
| is4 family transposase | CALAB_RS08730 | Not Available | Positive | 2187063 - 2189207 | 82380.2 |
| is1634 family transposase | CALAB_RS08735 | Not Available | Positive | 2189453 - 2191249 | 70184.1 |
| tetratricopeptide repeat protein | CALAB_RS08740 | Not Available | Negative | 2191390 - 2193219 | 70744.6 |
| rod shape-determining protein roda | CALAB_RS08745 | Not Available | Negative | 2193491 - 2194714 | 46041.2 |
| penicillin-binding protein 2 | CALAB_RS08750 | Not Available | Negative | 2194716 - 2196578 | 70164.7 |
| rod shape-determining protein mred | CALAB_RS08755 | Not Available | Negative | 2196578 - 2197066 | 18286.4 |
| rod shape-determining protein mrec | CALAB_RS08760 | Not Available | Negative | 2197050 - 2197859 | 30579.4 |
| rod shape-determining protein | CALAB_RS08765 | Not Available | Negative | 2198026 - 2199060 | 37235.2 |
| s66 peptidase family protein | CALAB_RS08770 | Not Available | Negative | 2199171 - 2200112 | 35225.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
