Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ykva family protein | CALAB_RS08670 | Not Available | Negative | 2170588 - 2171052 | 17788.6 |
| terb family tellurite resistance protein | CALAB_RS08675 | Not Available | Negative | 2171213 - 2172055 | 31661.4 |
| flgd immunoglobulin-like domain containing protein | CALAB_RS08680 | Not Available | Positive | 2172269 - 2174089 | 67658.6 |
| rubrerythrin family protein | CALAB_RS08685 | Not Available | Positive | 2174157 - 2174660 | 18724.5 |
| metal-dependent transcriptional regulator | CALAB_RS19955 | Not Available | Negative | 2174767 - 2175303 | 20899.3 |
| t9ss type a sorting domain-containing protein | CALAB_RS19960 | Not Available | Positive | 2177069 - 2179222 | 80624.6 |
| nucleotidyltransferase family protein | CALAB_RS08705 | Not Available | Negative | 2179265 - 2179999 | 27849.0 |
| phosphotransferase | CALAB_RS08710 | Not Available | Negative | 2180002 - 2181441 | 56497.7 |
| m14 family metallopeptidase | CALAB_RS08715 | Not Available | Positive | 2181594 - 2183405 | 70622.3 |
| n-acetylmuramoyl-l-alanine amidase-like domain-containing protein | CALAB_RS08720 | Not Available | Positive | 2183405 - 2184313 | 34990.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
