Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-bladed beta-propeller | CALAB_RS08625 | Not Available | Positive | 2152724 - 2153707 | 39284.0 |
| 6-bladed beta-propeller | CALAB_RS08630 | Not Available | Positive | 2154207 - 2155295 | 42901.5 |
| o-antigen ligase family protein | CALAB_RS08635 | Not Available | Positive | 2155704 - 2157245 | 59275.2 |
| efflux rnd transporter periplasmic adaptor subunit | CALAB_RS08640 | Not Available | Positive | 2157246 - 2158376 | 42149.1 |
| efflux rnd transporter permease subunit | CALAB_RS08645 | Not Available | Positive | 2158407 - 2161415 | 112625.0 |
| efflux rnd transporter permease subunit | CALAB_RS08650 | Not Available | Positive | 2161412 - 2164582 | 121969.0 |
| s16 family serine protease | CALAB_RS21970 | Not Available | Positive | 2164613 - 2164738 | 4865.08 |
| tetratricopeptide repeat protein | CALAB_RS08655 | Not Available | Positive | 2165024 - 2166304 | 49579.1 |
| peroxiredoxin family protein | CALAB_RS08660 | Not Available | Positive | 2166301 - 2167179 | 34487.6 |
| sensor histidine kinase | CALAB_RS08665 | Not Available | Negative | 2168362 - 2170164 | 69020.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
