Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | CALAB_RS08475 | Not Available | Negative | 2119086 - 2121251 | 79647.6 |
| na+/h+ antiporter nhac family protein | CALAB_RS08480 | Not Available | Negative | 2121267 - 2123180 | 70397.4 |
| gwxtd domain-containing protein | CALAB_RS08485 | Not Available | Positive | 2123365 - 2124633 | 50792.9 |
| gfo/idh/moca family protein | CALAB_RS08490 | Not Available | Positive | 2124642 - 2125703 | 39747.1 |
| aminotransferase class v-fold plp-dependent enzyme | CALAB_RS08495 | Not Available | Positive | 2125751 - 2127157 | 52904.2 |
| alanyl-trna editing protein | CALAB_RS19945 | Not Available | Positive | 2127178 - 2128353 | 45028.0 |
| hypothetical protein | CALAB_RS08505 | Not Available | Positive | 2128378 - 2128926 | 21121.4 |
| satd family protein | CALAB_RS08510 | Not Available | Positive | 2128930 - 2129574 | 24951.3 |
| cpbp family intramembrane glutamic endopeptidase | CALAB_RS08515 | Not Available | Negative | 2129562 - 2130380 | 30606.3 |
| trmh family rna methyltransferase | CALAB_RS08520 | Not Available | Negative | 2130373 - 2131182 | 30071.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
