Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wd40/yvtn/bnr-like repeat-containing protein | CALAB_RS00625 | Not Available | Positive | 166531 - 167376 | 32402.1 |
| t9ss type a sorting domain-containing protein | CALAB_RS00630 | Not Available | Positive | 167373 - 171350 | 149220.0 |
| l-type lectin-domain containing protein | CALAB_RS00635 | Not Available | Positive | 171636 - 172721 | 40139.6 |
| hypothetical protein | CALAB_RS21205 | Not Available | Positive | 172736 - 172873 | 5219.55 |
| hypothetical protein | CALAB_RS00640 | Not Available | Positive | 172890 - 173663 | 29530.7 |
| ankyrin repeat domain-containing protein | CALAB_RS00645 | Not Available | Positive | 173973 - 175457 | 53806.1 |
| hypothetical protein | CALAB_RS00650 | Not Available | Positive | 175479 - 177821 | 87239.3 |
| n-acetylmuramoyl-l-alanine amidase | CALAB_RS00655 | Not Available | Positive | 178262 - 178897 | 23727.6 |
| 3-phosphoglycerate dehydrogenase | CALAB_RS00660 | Not Available | Negative | 179673 - 180596 | 33836.8 |
| nfact rna binding domain-containing protein | CALAB_RS00665 | Not Available | Negative | 180780 - 181154 | 14103.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
