Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | CALAB_RS08040 | Not Available | Negative | 2007754 - 2009025 | 47210.0 |
| efflux rnd transporter periplasmic adaptor subunit | CALAB_RS08045 | Not Available | Negative | 2009036 - 2010319 | 48567.1 |
| hlyd family secretion protein | CALAB_RS08050 | Not Available | Negative | 2010312 - 2011424 | 42732.3 |
| acetate--coa ligase | CALAB_RS08055 | Not Available | Positive | 2011813 - 2013714 | 71827.7 |
| aaa family atpase | CALAB_RS08060 | Not Available | Negative | 2014010 - 2014993 | 36846.8 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | CALAB_RS08065 | Not Available | Positive | 2015196 - 2016263 | 40649.5 |
| glycosyltransferase | CALAB_RS08070 | Not Available | Positive | 2016318 - 2017415 | 42548.1 |
| lysylphosphatidylglycerol synthase transmembrane domain-containing protein | CALAB_RS08075 | Not Available | Positive | 2017509 - 2018465 | 37031.4 |
| thermonuclease family protein | CALAB_RS08080 | Not Available | Positive | 2018489 - 2019436 | 35909.7 |
| radical sam protein | CALAB_RS08085 | Not Available | Positive | 2019465 - 2020625 | 45135.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
