Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor | CALAB_RS00575 | Not Available | Positive | 151922 - 153628 | 65507.0 |
| trkh family potassium uptake protein | CALAB_RS00580 | Not Available | Positive | 153709 - 155523 | 67261.3 |
| potassium channel family protein | CALAB_RS00585 | Not Available | Positive | 155543 - 156229 | 24923.6 |
| duf3857 domain-containing protein | CALAB_RS00590 | Not Available | Positive | 156671 - 157702 | 40516.9 |
| hypothetical protein | CALAB_RS00595 | Not Available | Positive | 157742 - 158653 | 34434.5 |
| sigma-54-dependent transcriptional regulator | CALAB_RS00600 | Not Available | Negative | 158888 - 160312 | 54781.5 |
| atp-binding protein | CALAB_RS00605 | Not Available | Negative | 160329 - 162857 | 97119.5 |
| lamg domain-containing protein | CALAB_RS00610 | Not Available | Positive | 163089 - 164882 | 67847.1 |
| hypothetical protein | CALAB_RS00615 | Not Available | Positive | 164936 - 166048 | 41757.0 |
| hypothetical protein | CALAB_RS00620 | Not Available | Positive | 166071 - 166499 | 15859.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
