Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan recognition family protein | CALAB_RS07890 | Not Available | Negative | 1957401 - 1957997 | 22765.4 |
| phosphoenolpyruvate carboxykinase | CALAB_RS07895 | Not Available | Positive | 1958298 - 1959902 | 60297.9 |
| dj-1 family glyoxalase iii | CALAB_RS07900 | Not Available | Negative | 1960097 - 1960651 | 20169.5 |
| udp-2,3-diacylglucosamine diphosphatase | CALAB_RS07905 | Not Available | Positive | 1960814 - 1961560 | 29222.1 |
| hypothetical protein | CALAB_RS21330 | Not Available | Negative | 1961592 - 1961753 | 6073.53 |
| is1634 family transposase | CALAB_RS07910 | Not Available | Negative | 1961806 - 1963467 | 64724.1 |
| m20/m25/m40 family metallo-hydrolase | CALAB_RS07915 | Not Available | Negative | 1963596 - 1964786 | 44271.8 |
| porv/porq family protein | CALAB_RS07920 | Not Available | Negative | 1964853 - 1965845 | 36700.6 |
| hypothetical protein | CALAB_RS07925 | Not Available | Negative | 1965869 - 1967884 | 75385.2 |
| tonb-dependent receptor | CALAB_RS07930 | Not Available | Negative | 1967911 - 1970718 | 106258.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
