Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome small subunit-dependent gtpase a | CALAB_RS07595 | Not Available | Positive | 1898746 - 1899549 | 30245.9 |
| is1634 family transposase | CALAB_RS07600 | Not Available | Negative | 1899748 - 1901409 | 64694.1 |
| is1182 family transposase | CALAB_RS07605 | Not Available | Positive | 1901779 - 1903365 | 61382.2 |
| energy transducer tonb | CALAB_RS07610 | Not Available | Negative | 1904363 - 1904977 | 23296.5 |
| sigma-54-dependent transcriptional regulator | CALAB_RS07615 | Not Available | Negative | 1905205 - 1906533 | 50578.7 |
| sensor histidine kinase | CALAB_RS07620 | Not Available | Negative | 1906536 - 1906874 | 12424.1 |
| helix-turn-helix domain-containing protein | CALAB_RS07625 | Not Available | Negative | 1907090 - 1907545 | 17406.3 |
| hypothetical protein | CALAB_RS21095 | Not Available | Positive | 1907629 - 1907799 | 6475.16 |
| phage regulatory cii family protein | CALAB_RS07630 | Not Available | Positive | 1907866 - 1908333 | 17709.5 |
| mu transposase c-terminal domain-containing protein | CALAB_RS07635 | Not Available | Positive | 1908504 - 1910528 | 77684.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
