Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CALAB_RS07550 | Not Available | Negative | 1891552 - 1892469 | 35343.6 |
| hypothetical protein | CALAB_RS07555 | Not Available | Negative | 1892508 - 1892783 | 10506.8 |
| hypothetical protein | CALAB_RS20915 | Not Available | Negative | 1892794 - 1892991 | 7891.67 |
| phage regulatory cii family protein | CALAB_RS07560 | Not Available | Negative | 1893142 - 1893609 | 17774.6 |
| helix-turn-helix domain-containing protein | CALAB_RS20920 | Not Available | Negative | 1893675 - 1893845 | 6346.9 |
| helix-turn-helix transcriptional regulator | CALAB_RS19895 | Not Available | Positive | 1893916 - 1894383 | 17789.5 |
| trna epoxyqueuosine(34) reductase queg | CALAB_RS07575 | Not Available | Negative | 1894947 - 1895900 | 36641.3 |
| duf2085 domain-containing protein | CALAB_RS07580 | Not Available | Positive | 1896136 - 1896597 | 17124.1 |
| hypothetical protein | CALAB_RS07585 | Not Available | Positive | 1896594 - 1897076 | 18151.5 |
| thymidine phosphorylase | CALAB_RS07590 | Not Available | Positive | 1897301 - 1898620 | 47831.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
