Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histone deacetylase | CALAB_RS00520 | Not Available | Negative | 139725 - 140660 | 36265.9 |
| asparaginase | CALAB_RS00525 | Not Available | Negative | 140657 - 141646 | 36895.7 |
| lamin tail domain-containing protein | CALAB_RS00530 | Not Available | Negative | 142663 - 144357 | 62897.6 |
| nad(p)/fad-dependent oxidoreductase | CALAB_RS00535 | Not Available | Negative | 144428 - 145672 | 46789.8 |
| site-specific tyrosine recombinase xerd | CALAB_RS00540 | Not Available | Negative | 145678 - 146607 | 36365.0 |
| hypothetical protein | CALAB_RS00545 | Not Available | Negative | 146600 - 147058 | 17286.8 |
| bacillithiol biosynthesis deacetylase bshb1 | CALAB_RS00550 | Not Available | Negative | 147096 - 147806 | 26862.1 |
| tetratricopeptide repeat protein | CALAB_RS00555 | Not Available | Negative | 148006 - 148473 | 18186.2 |
| sigma-54 interaction domain-containing protein | CALAB_RS00560 | Not Available | Negative | 148616 - 149965 | 51228.1 |
| tetratricopeptide repeat protein | CALAB_RS00570 | Not Available | Positive | 150726 - 151616 | 34368.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
