Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 glutamine amidotransferase-like domain-containing protein | CALAB_RS07340 | Not Available | Positive | 1857441 - 1858136 | 25886.1 |
| mechanosensitive ion channel family protein | CALAB_RS07345 | Not Available | Positive | 1858133 - 1859374 | 47798.2 |
| m14 family murein peptide amidase a | CALAB_RS07350 | Not Available | Negative | 1860044 - 1860841 | 29768.6 |
| wd40/yvtn/bnr-like repeat-containing protein | CALAB_RS07355 | Not Available | Positive | 1861047 - 1864400 | 124752.0 |
| hypothetical protein | CALAB_RS21315 | Not Available | Negative | 1864672 - 1864827 | 5881.42 |
| hypothetical protein | CALAB_RS07360 | Not Available | Negative | 1864830 - 1865204 | 14398.0 |
| tape measure protein | CALAB_RS07365 | Not Available | Negative | 1865204 - 1868050 | 106449.0 |
| hypothetical protein | CALAB_RS07370 | Not Available | Negative | 1868052 - 1869413 | 52028.2 |
| hypothetical protein | CALAB_RS07375 | Not Available | Negative | 1869394 - 1869780 | 14962.7 |
| hypothetical protein | CALAB_RS21320 | Not Available | Negative | 1869823 - 1869966 | 5846.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
