Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | CALAB_RS07235 | Not Available | Positive | 1835652 - 1836020 | 14036.7 |
| [fefe] hydrogenase h-cluster maturation gtpase hydf | CALAB_RS07240 | Not Available | Negative | 1836041 - 1837270 | 45641.8 |
| aspartate ammonia-lyase | CALAB_RS07245 | Not Available | Negative | 1837267 - 1838673 | 51268.0 |
| [fefe] hydrogenase h-cluster radical sam maturase hydg | CALAB_RS07250 | Not Available | Negative | 1838683 - 1840107 | 54444.3 |
| hypothetical protein | CALAB_RS21310 | Not Available | Negative | 1840275 - 1841435 | 44628.7 |
| [fefe] hydrogenase h-cluster radical sam maturase hyde | CALAB_RS07260 | Not Available | Negative | 1841469 - 1842524 | 40176.6 |
| paai family thioesterase | CALAB_RS07265 | Not Available | Negative | 1842705 - 1843091 | 14042.3 |
| hybrid sensor histidine kinase/response regulator | CALAB_RS07270 | Not Available | Negative | 1843175 - 1844317 | 43038.5 |
| response regulator | CALAB_RS07275 | Not Available | Negative | 1844317 - 1844712 | 15161.3 |
| [fe-fe] hydrogenase large subunit c-terminal domain-containing protein | CALAB_RS07280 | Not Available | Negative | 1844915 - 1846927 | 75048.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
