Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-ribbon domain-containing protein | CALAB_RS21965 | Not Available | Negative | 1825079 - 1825301 | 8263.14 |
| type ii toxin-antitoxin system hicb family antitoxin | CALAB_RS07190 | Not Available | Negative | 1825298 - 1825501 | 7436.87 |
| duf4160 domain-containing protein | CALAB_RS07195 | Not Available | Positive | 1826053 - 1826289 | 9522.28 |
| duf2442 domain-containing protein | CALAB_RS07200 | Not Available | Positive | 1826270 - 1826575 | 11458.6 |
| hypothetical protein | CALAB_RS07205 | Not Available | Negative | 1826808 - 1827014 | 7963.74 |
| hypothetical protein | CALAB_RS07210 | Not Available | Positive | 1827305 - 1828165 | 33365.3 |
| is1182 family transposase | CALAB_RS07215 | Not Available | Negative | 1828619 - 1830205 | 61382.2 |
| nitrilase-related carbon-nitrogen hydrolase | CALAB_RS07220 | Not Available | Positive | 1830649 - 1831464 | 30794.8 |
| atp-binding protein | CALAB_RS07225 | Not Available | Positive | 1831874 - 1832998 | 43840.6 |
| sodium:solute symporter | CALAB_RS07230 | Not Available | Negative | 1834066 - 1835565 | 54347.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
