Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pd40 domain-containing protein | CALAB_RS19875 | Not Available | Positive | 1813465 - 1816635 | 123544.0 |
| hypothetical protein | CALAB_RS07150 | Not Available | Positive | 1816764 - 1817693 | 35997.8 |
| hypothetical protein | CALAB_RS07155 | Not Available | Positive | 1817709 - 1818437 | 28499.7 |
| sdr family oxidoreductase | CALAB_RS07160 | Not Available | Positive | 1818440 - 1819333 | 32980.8 |
| hypothetical protein | CALAB_RS21305 | Not Available | Negative | 1819511 - 1819648 | 5103.17 |
| hypothetical protein | CALAB_RS07165 | Not Available | Positive | 1820066 - 1820794 | 28802.7 |
| transposase | CALAB_RS07170 | Not Available | Positive | 1820922 - 1821290 | 14327.8 |
| fg-gap-like repeat-containing protein | CALAB_RS07175 | Not Available | Positive | 1821436 - 1823202 | 68097.6 |
| atp-binding protein | CALAB_RS07180 | Not Available | Negative | 1823573 - 1824718 | 44498.9 |
| flgd immunoglobulin-like domain containing protein | CALAB_RS07185 | Not Available | Positive | 1824803 - 1825057 | 9696.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
