Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uvrd-helicase domain-containing protein | CALAB_RS06940 | Not Available | Positive | 1763046 - 1766621 | 138397.0 |
| ribonuclease hii | CALAB_RS06945 | Not Available | Positive | 1767389 - 1768063 | 25101.5 |
| shikimate kinase | CALAB_RS06950 | Not Available | Positive | 1768078 - 1768638 | 21266.9 |
| 3-dehydroquinate synthase | CALAB_RS06955 | Not Available | Positive | 1768625 - 1769713 | 40689.8 |
| mbl fold metallo-hydrolase | CALAB_RS06960 | Not Available | Positive | 1769713 - 1770480 | 28909.9 |
| type ii 3-dehydroquinate dehydratase | CALAB_RS06965 | Not Available | Positive | 1770494 - 1770922 | 15952.1 |
| lipopolysaccharide biosynthesis protein | CALAB_RS06970 | Not Available | Positive | 1770932 - 1772401 | 55738.7 |
| tetraacyldisaccharide 4'-kinase | CALAB_RS19870 | Not Available | Positive | 1772398 - 1773453 | 39668.0 |
| Trna-met | Not Available | Not Available | Positive | 1773465 - 1773538 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1773579 - 1773651 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
