Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated endoribonuclease cas6 | CALAB_RS06690 | Not Available | Positive | 1700678 - 1701475 | 31220.8 |
| hypothetical protein | CALAB_RS06695 | Not Available | Positive | 1701499 - 1703322 | 72251.9 |
| type i crispr-associated protein cas7 | CALAB_RS06700 | Not Available | Positive | 1703357 - 1704304 | 36137.9 |
| type i-b crispr-associated protein cas5b | CALAB_RS06705 | Not Available | Positive | 1704307 - 1705098 | 30455.8 |
| crispr-associated helicase/endonuclease cas3 | CALAB_RS06710 | Not Available | Positive | 1705079 - 1707796 | 106273.0 |
| crispr-associated protein cas4 | CALAB_RS06715 | Not Available | Positive | 1707812 - 1708321 | 20089.2 |
| type i-b crispr-associated endonuclease cas1b | CALAB_RS06720 | Not Available | Positive | 1708364 - 1709368 | 38866.2 |
| crispr-associated endonuclease cas2 | CALAB_RS06725 | Not Available | Positive | 1709389 - 1709652 | 10307.9 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | CALAB_RS06735 | Not Available | Positive | 1712207 - 1714879 | 100942.0 |
| 2-oxo acid dehydrogenase subunit e2 | CALAB_RS06740 | Not Available | Positive | 1714917 - 1716245 | 47957.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
