Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor plug domain-containing protein | CALAB_RS06635 | Not Available | Negative | 1689018 - 1690829 | 69440.4 |
| eama family transporter | CALAB_RS06640 | Not Available | Positive | 1690954 - 1691808 | 31969.5 |
| tigr01212 family radical sam protein | CALAB_RS06650 | Not Available | Positive | 1692072 - 1693037 | 37504.9 |
| abc transporter permease | CALAB_RS06655 | Not Available | Negative | 1693460 - 1694584 | 42045.1 |
| abc transporter permease | CALAB_RS06660 | Not Available | Negative | 1694587 - 1695690 | 41516.4 |
| abc transporter atp-binding protein | CALAB_RS06665 | Not Available | Negative | 1695687 - 1696418 | 27679.5 |
| abc transporter atp-binding protein | CALAB_RS06670 | Not Available | Negative | 1696421 - 1697353 | 35003.9 |
| hlyd family secretion protein | CALAB_RS06675 | Not Available | Negative | 1697577 - 1698461 | 32981.4 |
| tolc family protein | CALAB_RS06680 | Not Available | Negative | 1698458 - 1699768 | 49815.8 |
| tetr/acrr family transcriptional regulator | CALAB_RS06685 | Not Available | Negative | 1699765 - 1700403 | 24747.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
