Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diphosphomevalonate decarboxylase | CALAB_RS06540 | Not Available | Positive | 1659334 - 1660320 | 35569.4 |
| mevalonate kinase | CALAB_RS06545 | Not Available | Positive | 1660317 - 1661381 | 38825.1 |
| hydroxymethylglutaryl-coa reductase, degradative | CALAB_RS06550 | Not Available | Positive | 1661408 - 1663690 | 83004.0 |
| isopentenyl-diphosphate delta-isomerase | CALAB_RS06555 | Not Available | Positive | 1663707 - 1664276 | 22222.3 |
| glycosyltransferase family 4 protein | CALAB_RS06560 | Not Available | Positive | 1664310 - 1665566 | 48654.1 |
| glycosyltransferase family 4 protein | CALAB_RS06565 | Not Available | Positive | 1665578 - 1666810 | 47429.7 |
| wd40 repeat domain-containing protein | CALAB_RS06570 | Not Available | Positive | 1666845 - 1667864 | 38364.7 |
| type ix secretion system sortase poru | CALAB_RS06575 | Not Available | Negative | 1667847 - 1671842 | 150065.0 |
| hypothetical protein | CALAB_RS21295 | Not Available | Negative | 1672231 - 1672368 | 5238.26 |
| acetate--coa ligase family protein | CALAB_RS06580 | Not Available | Positive | 1673066 - 1675162 | 76680.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
