Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zf-hc2 domain-containing protein | CALAB_RS00420 | Not Available | Negative | 112851 - 113297 | 17686.9 |
| rna polymerase sigma factor | CALAB_RS00425 | Not Available | Negative | 113294 - 113869 | 23052.5 |
| sdr family oxidoreductase | CALAB_RS00430 | Not Available | Positive | 114349 - 115125 | 27850.8 |
| phosphopyruvate hydratase | CALAB_RS00435 | Not Available | Positive | 115388 - 116671 | 46193.0 |
| ftsb family cell division protein | CALAB_RS00440 | Not Available | Positive | 116717 - 117034 | 12726.9 |
| hypothetical protein | CALAB_RS00445 | Not Available | Positive | 117127 - 118815 | 67747.8 |
| is1182 family transposase | CALAB_RS00450 | Not Available | Positive | 119080 - 120666 | 61352.2 |
| l-glutamate gamma-semialdehyde dehydrogenase | CALAB_RS00455 | Not Available | Positive | 120898 - 122529 | 61160.2 |
| putative lps assembly protein lptd | CALAB_RS00460 | Not Available | Positive | 122767 - 125316 | 97973.4 |
| tetratricopeptide repeat protein | CALAB_RS00465 | Not Available | Negative | 126212 - 127240 | 40230.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
