Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-loop ntpase | CALAB_RS06325 | Not Available | Negative | 1613306 - 1614361 | 38244.6 |
| hypothetical protein | CALAB_RS06330 | Not Available | Negative | 1614512 - 1615171 | 25303.5 |
| dna repair protein recn | CALAB_RS06335 | Not Available | Negative | 1615248 - 1616972 | 65024.0 |
| two-component regulator propeller domain-containing protein | CALAB_RS06340 | Not Available | Negative | 1616975 - 1619356 | 88789.0 |
| 6,7-dimethyl-8-ribityllumazine synthase | CALAB_RS06345 | Not Available | Negative | 1619385 - 1619846 | 16484.1 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | CALAB_RS06350 | Not Available | Negative | 1619869 - 1621095 | 45940.8 |
| riboflavin synthase | CALAB_RS06355 | Not Available | Negative | 1621423 - 1622070 | 23782.7 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | CALAB_RS06360 | Not Available | Negative | 1622102 - 1623190 | 40698.9 |
| t9ss type a sorting domain-containing protein | CALAB_RS06365 | Not Available | Positive | 1623583 - 1625523 | 70803.5 |
| uma2 family endonuclease | CALAB_RS20900 | Not Available | Negative | 1626261 - 1626515 | 9762.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
