Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1182 family transposase | CALAB_RS06125 | Not Available | Negative | 1564202 - 1565962 | 68738.8 |
| duf5689 domain-containing protein | CALAB_RS19835 | Not Available | Positive | 1566488 - 1569256 | 99462.0 |
| ob-fold nucleic acid binding domain-containing protein | CALAB_RS06135 | Not Available | Positive | 1569340 - 1572393 | 109400.0 |
| hypothetical protein | CALAB_RS06140 | Not Available | Positive | 1572405 - 1573292 | 32655.2 |
| helix-hairpin-helix domain-containing protein | CALAB_RS06145 | Not Available | Positive | 1573430 - 1576006 | 100358.0 |
| hypothetical protein | CALAB_RS06150 | Not Available | Positive | 1576018 - 1577280 | 48163.5 |
| bifunctional metallophosphatase/5'-nucleotidase | CALAB_RS06155 | Not Available | Positive | 1577298 - 1578902 | 59769.0 |
| response regulator transcription factor | CALAB_RS06160 | Not Available | Negative | 1579107 - 1579484 | 15009.5 |
| hypothetical protein | CALAB_RS06165 | Not Available | Negative | 1579501 - 1579716 | 8259.02 |
| sigma-54-dependent transcriptional regulator | CALAB_RS06170 | Not Available | Negative | 1579915 - 1581267 | 51985.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
